The Formation of Low-Mass Binary Star Systems Via Turbulent Fragmentation

We characterize the infall rate onto protostellar systems forming in self-gravitating radiation-hydrodynamic simulations. Using two dimensionless parameters to determine disks' susceptability to gravitational fragmentation, we infer limits on protostellar system multiplicity and the mechanism of binary formation. We show that these parameters give robust predictions even in the case of marginally resolved protostellar disks. We find that protostellar systems with radiation feedback predominately form binaries via turbulent fragmentation, not disk instability, and we predict turbulent fragmentation is the dominant channel for binary formation for low-mass stars. We clearly demonstrate that systems forming in simulations including radiative feedback have fundamentally different parameters than those in purely hydrodynamic simulations.Comment: 11 pages, 10 figures, accepted to Ap

TurbuStat: Turbulence Statistics in Python

We present TurbuStat (v1.0): a Python package for computing turbulence statistics in spectral-line data cubes. TurbuStat includes implementations of fourteen methods for recovering turbulent properties from observational data. Additional features of the software include: distance metrics for comparing two data sets; a segmented linear model for fitting lines with a break-point; a two-dimensional elliptical power-law model; multi-core fast-fourier-transform support; a suite for producing simulated observations of fractional Brownian Motion fields, including two-dimensional images and optically-thin HI data cubes; and functions for creating realistic world coordinate system information for synthetic observations. This paper summarizes the TurbuStat package and provides representative examples using several different methods. TurbuStat is an open-source package and we welcome community feedback and contributions.Comment: Accepted in AJ. 21 pages, 8 figure

The Cop Number of the One-Cop-Moves Game on Planar Graphs

Cops and robbers is a vertex-pursuit game played on graphs. In the classical cops-and-robbers game, a set of cops and a robber occupy the vertices of the graph and move alternately along the graph's edges with perfect information about each other's positions. If a cop eventually occupies the same vertex as the robber, then the cops win; the robber wins if she can indefinitely evade capture. Aigner and Frommer established that in every connected planar graph, three cops are sufficient to capture a single robber. In this paper, we consider a recently studied variant of the cops-and-robbers game, alternately called the one-active-cop game, one-cop-moves game or the lazy-cops-and-robbers game, where at most one cop can move during any round. We show that Aigner and Frommer's result does not generalise to this game variant by constructing a connected planar graph on which a robber can indefinitely evade three cops in the one-cop-moves game. This answers a question recently raised by Sullivan, Townsend and Werzanski.Comment: 32 page

On the Role of Disks in the Formation of Stellar Systems: A Numerical Parameter Study of Rapid Accretion

We study rapidly accreting, gravitationally unstable disks with a series of global, three dimensional, numerical experiments using the code ORION. In this paper we conduct a numerical parameter study focused on protostellar disks, and show that one can predict disk behavior and the multiplicity of the accreting star system as a function of two dimensionless parameters which compare the disk's accretion rate to its sound speed and orbital period. Although gravitational instabilities become strong, we find that fragmentation into binary or multiple systems occurs only when material falls in several times more rapidly than the canonical isothermal limit. The disk-to-star accretion rate is proportional to the infall rate, and governed by gravitational torques generated by low-m spiral modes. We also confirm the existence of a maximum stable disk mass: disks that exceed ~50% of the total system mass are subject to fragmentation and the subsequent formation of binary companions.Comment: 16 pages, 12 figures, submitte

Assessing the Impact of Astrochemistry on Molecular Cloud Turbulence Statistics

We analyze hydrodynamic simulations of turbulent, star-forming molecular clouds that are post-processed with the photo-dissociation region astrochemistry code 3D-PDR. We investigate the sensitivity of 15 commonly applied turbulence statistics to post-processing assumptions, namely variations in gas temperature, abundance and external radiation field. We produce synthetic $^{12}$CO(1-0) and CI($^{3}$P$_{1}$-$^{3}$P$_{0}$) observations and examine how the variations influence the resulting emission distributions. To characterize differences between the datasets, we perform statistical measurements, identify diagnostics sensitive to our chemistry parameters, and quantify the statistic responses by using a variety of distance metrics. We find that multiple turbulent statistics are sensitive not only to the chemical complexity but also to the strength of the background radiation field. The statistics with meaningful responses include principal component analysis, spatial power spectrum and bicoherence. A few of the statistics, such as the velocity coordinate spectrum, are primarily sensitive to the type of tracer being utilized, while others, like the delta-variance, strongly respond to the background radiation field. Collectively, these findings indicate that more realistic chemistry impacts the responses of turbulent statistics and is necessary for accurate statistical comparisons between models and observed molecular clouds.Comment: 27 pages, 21 figures, accepted to Ap

Cluster J Mycobacteriophages: Intron Splicing in Capsid and Tail Genes

Bacteriophages isolated on Mycobacterium smegmatis mc2155 represent many distinct genomes sharing little or no DNA sequence similarity. The genomes are architecturally mosaic and are replete with genes of unknown function. A new group of genomes sharing substantial nucleotide sequences constitute Cluster J. The six mycobacteriophages forming Cluster J are morphologically members of the Siphoviridae, but have unusually long genomes ranging from 106.3 to 117 kbp. Reconstruction of the capsid by cryo-electron microscopy of mycobacteriophage BAKA reveals an icosahedral structure with a triangulation number of 13. All six phages are temperate and homoimmune, and prophage establishment involves integration into a tRNA-Leu gene not previously identified as a mycobacterial attB site for phage integration. The Cluster J genomes provide two examples of intron splicing within the virion structural genes, one in a major capsid subunit gene, and one in a tail gene. These genomes also contain numerous free-standing HNH homing endonuclease, and comparative analysis reveals how these could contribute to genome mosaicism. The unusual Cluster J genomes provide new insights into phage genome architecture, gene function, capsid structure, gene mobility, intron splicing, and evolution. © 2013 Pope et al

Interactions between brown-dwarf binaries and Sun-like stars

Several mechanisms have been proposed for the formation of brown dwarfs, but there is as yet no consensus as to which -- if any -- are operative in nature. Any theory of brown dwarf formation must explain the observed statistics of brown dwarfs. These statistics are limited by selection effects, but they are becoming increasingly discriminating. In particular, it appears (a) that brown dwarfs that are secondaries to Sun-like stars tend to be on wide orbits, a\ga 100\,{\rm AU} (the Brown Dwarf Desert), and (b) that these brown dwarfs have a significantly higher chance of being in a close (a\la 10\,{\rm AU}) binary system with another brown dwarf than do brown dwarfs in the field. This then raises the issue of whether these brown dwarfs have formed {\it in situ}, i.e. by fragmentation of a circumstellar disc; or have formed elsewhere and subsequently been captured. We present numerical simulations of the purely gravitational interaction between a close brown-dwarf binary and a Sun-like star. These simulations demonstrate that such interactions have a negligible chance ($<0.001$) of leading to the close brown-dwarf binary being captured by the Sun-like star. Making the interactions dissipative by invoking the hydrodynamic effects of attendant discs might alter this conclusion. However, in order to explain the above statistics, this dissipation would have to favour the capture of brown-dwarf binaries over single brown-dwarfs, and we present arguments why this is unlikely. The simplest inference is that most brown-dwarf binaries -- and therefore possibly also most single brown dwarfs -- form by fragmentation of circumstellar discs around Sun-like protostars, with some of them subsequently being ejected into the field.Comment: 10 pages, 8 figures, Accepted for publication in Astrophysics and Space Scienc

Novel Humanized Recombinant T Cell Receptor Ligands Protect the Female Brain After Experimental Stroke

Transmigration of peripheral leukocytes to the brain is a major contributor to cerebral ischemic cell death mechanisms. Humanized partial major histocompatibility complex class II constructs (pMHC), covalently linked to myelin peptides, are effective for treating experimental stroke in males, but new evidence suggests that some inflammatory cell death mechanisms after brain injury are sex-specific. We here demonstrate that treatment with pMHC constructs also improves outcomes in female mice with middle cerebral artery occlusion (MCAO). HLA-DR2 transgenic female mice with MCAO were treated with RTL1000 (HLA-DR2 moiety linked to human MOG-35-55 peptide), HLA-DRa1-MOG-35-55, or vehicle (VEH) at 3, 24, 48, and 72 h after reperfusion and were recovered for 96 h or 2 weeks post-injury for measurement of histology (TTC staining) or behavioral testing. RTL1000- and DRa1-MOG-treated mice had profoundly reduced infarct volumes as compared to the VEH group, although higher doses of DRa1-MOG were needed for females vs. males evaluated previously. RTL1000-treated females also exhibited strongly improved functional recovery in a standard cylinder test. In novel studies of post-ischemic ultrasonic vocalization (USV), as measured by animal calls to their cage mates, we modeled in mice the post-stroke speech deficits common in human stroke survivors. The number of calls was reduced in injured animals relative to pre-MCAO baseline regardless of RTL1000 treatment status. However, call duration was significantly improved by RTL1000 treatment, suggesting benefit to the animal’s recovery of vocalization capability. We conclude that both the parent RTL1000 molecule and the novel non-polymorphic DRα1-MOG-35-55 construct were highly effective immunotherapies for treatment of transient cerebral ischemia in females